protti - Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools
Useful functions and workflows for proteomics quality control and data analysis of both limited proteolysis-coupled mass spectrometry (LiP-MS) (Feng et. al. (2014) <doi:10.1038/nbt.2999>) and regular bottom-up proteomics experiments. Data generated with search tools such as 'Spectronaut', 'MaxQuant' and 'Proteome Discover' can be easily used due to flexibility of functions.
Last updated 4 months ago
data-analysislip-msmass-spectrometryomicsproteinproteomicssystems-biology
8.58 score 61 stars 83 scripts 653 downloads
ggplate - Create Layout Plots of Biological Culture Plates and Microplates
Enables users to create simple plots of biological culture plates as well as microplates. Both continuous and discrete values can be plotted onto the plate layout.
Last updated 5 months ago
5.53 score 94 stars 24 scripts 373 downloads