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Links tojpquast

protti - Bottom-Up Proteomics and LiP-MS Quality Control and Data Analysis Tools

Useful functions and workflows for proteomics quality control and data analysis of both limited proteolysis-coupled mass spectrometry (LiP-MS) (Feng et. al. (2014) <doi:10.1038/nbt.2999>) and regular bottom-up proteomics experiments. Data generated with search tools such as 'Spectronaut', 'MaxQuant' and 'Proteome Discover' can be easily used due to flexibility of functions.

Last updated

data-analysislip-msmass-spectrometryomicsproteinproteomicssystems-biology

8.15 score 65 stars 175 scripts 835 downloads

ggplate - Create Layout Plots of Biological Culture Plates and Microplates

Enables users to create simple plots of biological culture plates as well as microplates. Both continuous and discrete values can be plotted onto the plate layout.

Last updated

5.83 score 106 stars 43 scripts 812 downloads